Miyakogusa Predicted Gene

Lj3g3v0323560.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KG92_SOYBN 304 55.4 72.1 (tr|I1KG92) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G72740.2 194 41.5 58.5 | Symbols: | Homeodomain-like/winged-helix DNA-binding family protein | chr1:27380499-27382687 REVERSE LENGTH=281
Medicago Medtr2g099610.1 264 48.9 60.5 | MYB transcription factor MYB91 | HC | chr2:42708481-42713744 | 20130731
Soybean Glyma07g00930.1 304 55.4 72.1  
LJGI gnl|LJGI|TC77305 1647 99.3 99.3 similar to UniRef100_Q0PJJ3 Cluster: MYB transcription factor MYB107; n=1; Glycine max|Rep: MYB transcription factor MYB107 - Glycine max (Soybean), partial (58%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0323560.1 length: 285 aa.
IPR001005 SANT/Myb domain
method AccNumber shortName E-value location
Molecular Function GO:0003682 chromatin binding    
HMMPfam PF00249 Myb_DNA-binding 3.4e-09 5-56
HMMSmart SM00717 SANT 5.6e-08 4-59
IPR005818 Histone H1/H5
Cellular Component GO:0000786 nucleosome    
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006334 nucleosome assembly    
HMMPfam PF00538 Linker_histone 2.8e-12 118-184
HMMSmart SM00526 Domain 7.6e-13 114-181
ProfileScan PS51504 H15 21.431 116-186
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 2e-13 5-56
superfamily SSF46689 Homeodomain-like 2.9e-09 5-57
IPR011991 Winged helix-turn-helix DNA-binding domain
Gene3D G3DSA:1.10.10.10 no description 3.9e-12 117-188
IPR017930 Myb domain
ProfileScan PS51294 HTH_MYB 12.109 1-62
no_ID  
HMMPanther PTHR21717 TELOMERIC 2.2e-51 1-282
HMMPanther PTHR21717:SF9 TELOMERIC 2.2e-51 1-282
Seg seg seg NA 226-238
superfamily SSF46785 "Winged 1.2e-15 112-199
Wolf-PSORT
Lj3g3v0323560.1	nucl 9, mito 3, cyto 1, plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0323560.1