Miyakogusa Predicted Gene

Lj3g3v0323290.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IUH0_MEDTR 1669 75.7 84.6 (tr|G7IUH0) Tir-nbs-lrr resistance protein OS=Medicago truncatula GN=MTR_2g099920 PE=4 SV=1
TAIR_pep AT5G17680.1 570 41.1 59.3 | Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr5:5822999-5827153 FORWARD LENGTH=1294
Medicago Medtr2g099920.1 1678 76.4 85.5 | disease resistance protein (TIR-NBS-LRR class), putative | HC | chr2:42862645-42855902 | 20130731
Soybean Glyma15g02870.1 1664 76.8 85.8  
LJGI gnl|LJGI|TC68071 1074 98.8 98.8 similar to UniRef100_Q2HVE0 Cluster: Leucine-rich repeat; Leucine-rich; n=1; Medicago truncatula|Rep: Leucine-rich repeat; Leucine-rich - Medicago truncatula (Barrel medic), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0323290.1 length: 1085 aa.
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Biological Process GO:0007165 signal transduction    
HMMPfam PF01582 TIR 4.1e-20 2-77
ProfileScan PS50104 TIR 16.374 1-83
superfamily SSF52200 Toll/Interleukin 5.5e-22 2-86
IPR000767 Disease resistance protein
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 1.4e-23 144-159
220-234
313-327
771-787
IPR002182 NB-ARC
Molecular Function GO:0043531 ADP binding    
HMMPfam PF00931 NB-ARC 2e-44 125-390
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.4e-27 103-350
no_ID  
Coil coil coiled-coil NA 113-134
Gene3D G3DSA:3.40.50.10140 no description 5e-07 2-77
Gene3D G3DSA:3.40.50.300 no description 2.5e-09 141-265
Gene3D G3DSA:3.80.10.10 no description 1.2e-31 517-791
HMMPanther PTHR11017 LEUCINE-RICH 4.8e-216 2-791
HMMPanther PTHR11017:SF130DISEASE RESISTANCE 4.8e-216 2-791
Seg seg seg NA 217-230
748-758
superfamily SSF46785 "Winged 6.9e-17 348-458
superfamily SSF52058 L 1.3e-46 420-844
Wolf-PSORT
Lj3g3v0323290.1	nucl 4.5, chlo 4, cysk_nucl 3, extr 2, cyto 1, mito 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0323290.1