Miyakogusa Predicted Gene
- Lj3g3v0323220.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MCZ9_SOYBN |
917 |
86.1 |
93.8 |
(tr|I1MCZ9) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT3G13790.2 |
652 |
62.3 |
76.6 |
| Symbols: ATBFRUCT1 | Glycosyl hydrolases family 32 protein | chr3:4533084-4535831 REVERSE LENGTH=581 |
| Medicago |
Medtr2g099950.1 |
904 |
84.4 |
92.8 |
| cell-wall invertase | HC | chr2:42876921-42873311 | 20130731 |
| Soybean |
Glyma15g02850.1 |
917 |
86.1 |
93.8 |
|
| LJGI |
gnl|LJGI|TC81586 |
1233 |
100.0 |
100.0 |
similar to UniRef100_Q2HVE4 Cluster: Sialidase; n=1; Medicago truncatula|Rep: Sialidase - Medicago truncatula (Barrel medic), partial (36%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0323220.1 |
length: 501 aa. |
| IPR001362 |
Glycoside hydrolase, family 32 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| HMMSmart |
SM00640 |
Glycosyl |
2.2e-208 |
1-455 |
| IPR008985 |
Concanavalin A-like lectin/glucanases superfamily |
| superfamily |
SSF49899 |
Concanavalin |
3e-38 |
299-498 |
| IPR013148 |
Glycosyl hydrolase family 32, N-terminal |
| HMMPfam |
PF00251 |
Glyco_hydro_32N |
2.3e-100 |
1-299 |
| IPR013189 |
Glycosyl hydrolase family 32, C-terminal |
| Gene3D |
G3DSA:2.60.120.560 |
no description |
3.6e-63 |
347-495 |
| HMMPfam |
PF08244 |
Glyco_hydro_32C |
5e-21 |
370-455 |
| IPR023296 |
Glycosyl hydrolase, five-bladed beta-propellor domain |
| Gene3D |
G3DSA:2.115.10.20 |
no description |
1.8e-08 |
12-281 |
| superfamily |
SSF75005 |
Arabinanase/levansucrase/invertase |
5.1e-86 |
1-300 |
| no_ID |
|
| HMMPanther |
PTHR31953 |
FAMILY |
4.4e-258 |
1-501 |
| HMMPanther |
PTHR31953:SF0 |
SUBFAMILY |
4.4e-258 |
1-501 |
- Wolf-PSORT
Lj3g3v0323220.1 chlo 7, cyto 2, plas 1.5, cyto_nucl 1.5, mito_plas 1.5, nucl 1, vacu 1, cysk 1, cysk_nucl 1, cyto_pero 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0323220.1 |
|