Miyakogusa Predicted Gene

Lj3g3v0323160.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1M5B7_SOYBN 791 78.2 84.6 (tr|I1M5B7) Beta-galactosidase OS=Glycine max PE=3 SV=1
TAIR_pep AT1G72990.1 619 65.7 80.1 | Symbols: BGAL17 | beta-galactosidase 17 | chr1:27457480-27462168 REVERSE LENGTH=697
Medicago Medtr2g100000.1 727 83.8 90.5 | beta-like galactosidase | HC | chr2:42906588-42922742 | 20130731
Soybean Glyma13g42560.3 791 78.2 84.6  
LJGI gnl|LJGI|TC60676 1413 100.0 100.0 similar to UniRef100_A7P6S3 Cluster: Beta-galactosidase; n=1; Vitis vinifera|Rep: Beta-galactosidase - Vitis vinifera (Grape), partial (28%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0323160.2 length: 968 aa.
IPR001944 Glycoside hydrolase, family 35
method AccNumber shortName E-value location
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
FPrintScan PR00742 GLHYDRLASE35 9.7e-39 550-567
571-589
626-645
682-697
775-790
841-857
HMMPanther PTHR23421 BETA-GALACTOSIDASE 2.4e-245 498-963
HMMPfam PF01301 Glyco_hydro_35 9.8e-116 547-873
IPR007087 Zinc finger, C2H2
Molecular Function GO:0008270 zinc ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 75-95
ProfileScan PS50157 ZINC_FINGER_C2H2_2 10.824 73-95
IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain
Molecular Function GO:0003676 nucleic acid binding    
Gene3D G3DSA:3.30.160.60 no description 0.00042 72-95
IPR013781 Glycoside hydrolase, catalytic domain
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Gene3D G3DSA:3.20.20.80 no description 1.8e-112 539-875
IPR015880 Zinc finger, C2H2-like
HMMSmart SM00355 zinc 1.4e+02 73-95
114-144
149-169
IPR017853 Glycoside hydrolase, superfamily
superfamily SSF51445 (Trans)glycosidases 2.7e-91 535-874
IPR019801 Glycoside hydrolase, family 35, conserved site
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
PatternScan PS01182 GLYCOSYL_HYDROL_F35 NA 684-696
no_ID  
HMMPanther PTHR23421:SF34 SUBFAMILY 2.4e-245 498-963
Seg seg seg NA 7-18
146-157
211-225
266-272
282-286
347-370
377-388
473-482
499-532
875-885
superfamily SSF57667 C2H2 0.00027 144-187
70-97
Wolf-PSORT
Lj3g3v0323160.2	nucl 6.5, chlo 4, cysk_nucl 4, mito 1, plas 1, extr 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0323160.2