Miyakogusa Predicted Gene

Lj3g3v0300710.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LSB6_SOYBN 729 64.7 74.5 (tr|K7LSB6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G05490.1 556 51.3 64.8 | Symbols: chr31 | chromatin remodeling 31 | chr1:1618795-1623195 REVERSE LENGTH=1410
Medicago Medtr7g050445.1 682 61.9 74.0 | SNF2 family amine-terminal protein | HC | chr7:16825131-16820145 | 20130731
Soybean Glyma12g00950.1 727 64.5 74.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0300710.2 length: 577 aa.
IPR000330 SNF2-related
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00176 SNF2_N 1.5e-27 13-325
IPR001650 Helicase, C-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 4e-11 416-489
HMMSmart SM00490 helicase 6.3e-16 400-489
ProfileScan PS51194 HELICASE_CTER 13.536 377-530
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 3.2e-05 2-237
ProfileScan PS51192 HELICASE_ATP_BIND_1 11.169 8-225
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 6.8e-32 287-535
14-239
no_ID  
Gene3D G3DSA:3.40.50.300 no description 8.2e-17 171-210
370-517
HMMPanther PTHR10799 SWI/SNF-RELATED 5.4e-193 15-559
HMMPanther PTHR10799:SF41 ATP 5.4e-193 15-559
Seg seg seg NA 136-147
309-325
546-558
Wolf-PSORT
Lj3g3v0300710.2	chlo 10, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0300710.2