Miyakogusa Predicted Gene

Lj3g3v0271550.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3RZY4_LOTJA 692 91.7 91.7 (tr|I3RZY4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G16230.3 418 57.7 72.4 | Symbols: | Predicted eukaryotic LigT | chr3:5500991-5503303 FORWARD LENGTH=409
Medicago Medtr2g101350.3 592 77.6 84.6 | AKAP7 2'5' RNA ligase-like domain protein | HC | chr2:43569443-43576508 | 20130731
Soybean Glyma15g02100.1 521 72.0 79.5  
LJGI gnl|LJGI|TC57510 1425 99.1 99.1 similar to UniRef100_A7P776 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (52%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0271550.1 length: 412 aa.
IPR004087 K Homology domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
HMMSmart SM00322 K 0.0029 48-116
IPR004088 K Homology domain, type 1
Molecular Function GO:0003723 RNA binding    
HMMPfam PF00013 KH_1 1.6e-06 60-110
ProfileScan PS50084 KH_TYPE_1 10.253 49-111
IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase
Molecular Function GO:0003824 catalytic activity    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0016070 RNA metabolic process    
Gene3D G3DSA:3.90.1140.10 no description 7.7e-12 234-405
IPR009210 Predicted eukaryotic LigT
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPIR PIRSF027019 Predicted 2.2e-05 17-406
IPR019510 Protein kinase A anchor protein, nuclear localisation signal domain
HMMPfam PF10469 AKAP7_NLS 3.1e-71 126-405
no_ID  
Gene3D G3DSA:3.30.1370.10 no description 3.2e-08 49-115
HMMPanther PTHR13360 FAMILY 1.1e-158 43-406
HMMPanther PTHR13360:SF4 RNA 1.1e-158 43-406
Seg seg seg NA 13-27
160-178
215-225
superfamily SSF54791 Eukaryotic 1e-11 48-129
Wolf-PSORT
Lj3g3v0271550.1	chlo 8, chlo_mito 6.5, mito 3, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0271550.1