Miyakogusa Predicted Gene

Lj3g3v0260470.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M3S7_SOYBN 231 93.3 95.8 (tr|K7M3S7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G26490.1 101 36.4 65.3 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr2:11268035-11269432 FORWARD LENGTH=465
Medicago Medtr2g101410.1 227 86.9 94.3 | F-box and wd40 domain protein, putative | HC | chr2:43602566-43604279 | 20130731
Soybean Glyma13g43290.1 231 93.3 95.8  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0260470.1 length: 122 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 0.11 3-31
37-72
86-121
HMMSmart SM00320 WD40 0.6 3-32
35-73
82-122
ProfileScan PS50082 WD_REPEATS_2 10.007 1-41
42-72
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 6.4e-22 3-121
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 20.672 1-122
superfamily SSF50978 WD40 4.1e-21 3-121
no_ID  
HMMPanther PTHR22844 F-BOX 3.5e-22 3-121
Wolf-PSORT
Lj3g3v0260470.1	cyto 9, cysk 2.5, cysk_nucl 2, mito 1, pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0260470.1