Miyakogusa Predicted Gene

Lj3g3v0260460.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M3S7_SOYBN 423 86.9 92.8 (tr|K7M3S7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G26490.1 163 40.1 60.8 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr2:11268035-11269432 FORWARD LENGTH=465
Medicago Medtr2g101410.1 416 82.2 89.7 | F-box and wd40 domain protein, putative | HC | chr2:43602566-43604279 | 20130731
Soybean Glyma13g43290.1 330 91.3 95.3  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0260460.1 length: 236 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 6.2e-06 8-22
28-63
126-156
165-211
HMMSmart SM00320 WD40 0.0022 26-64
73-113
120-157
163-212
ProfileScan PS50082 WD_REPEATS_2 9.406 1-32
33-63
127-156
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 2.2e-32 4-215
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 21.568 1-221
superfamily SSF50978 WD40 2.2e-29 1-212
IPR020472 G-protein beta WD-40 repeat
FPrintScan PR00320 GPROTEINBRPT 1.5e-05 10-24
144-158
199-213
no_ID  
HMMPanther PTHR22844 F-BOX 8.1e-37 1-214
Wolf-PSORT
Lj3g3v0260460.1	chlo 9, cyto 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0260460.1