Miyakogusa Predicted Gene

Lj3g3v0258390.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7M913_SOYBN 283 73.0 77.0 (tr|K7M913) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G50390.1 68.6 31.4 54.5 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:18702137-18703546 FORWARD LENGTH=469
Medicago Medtr2g101410.1 216 61.8 68.8 | F-box and wd40 domain protein, putative | HC | chr2:43602566-43604279 | 20130731
Soybean Glyma13g43290.1 275 70.9 77.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0258390.1 length: 202 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 0.00084 92-120
HMMSmart SM00320 WD40 95 81-120
123-160
ProfileScan PS50082 WD_REPEATS_2 8.938 88-121
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 9.6e-10 83-165
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 10.865 88-169
superfamily SSF50978 WD40 1.3e-09 80-159
no_ID  
Seg seg seg NA 49-68
Wolf-PSORT
Lj3g3v0258390.1	nucl 7, chlo 3, cyto 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0258390.1