Miyakogusa Predicted Gene
- Lj3g3v0257300.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T5L5_LOTJA |
358 |
100.0 |
100.0 |
(tr|I3T5L5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G52200.1 |
222 |
65.3 |
82.0 |
| Symbols: | PLAC8 family protein | chr1:19442271-19443407 REVERSE LENGTH=190 |
| Medicago |
Medtr2g101660.1 |
290 |
81.9 |
88.3 |
| plant cadmium resistance protein | HC | chr2:43737893-43736872 | 20130731 |
| Soybean |
Glyma15g01990.2 |
283 |
77.9 |
86.6 |
|
| LJGI |
gnl|LJGI|TC59489 |
981 |
98.6 |
98.6 |
homologue to UniRef100_Q2HU50 Cluster: Uncharacterized Cys-rich domain; n=1; Medicago truncatula|Rep: Uncharacterized Cys-rich domain - Medicago truncatula (Barrel medic), partial (73%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0257300.1 |
length: 170 aa. |
| IPR006461 |
Uncharacterised protein family Cys-rich |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF04749 |
PLAC8 |
6.9e-27 |
31-130 |
| HMMTigr |
TIGR01571 |
A_thal_Cys_rich: |
1.4e-29 |
30-131 |
| no_ID |
|
| HMMPanther |
PTHR15907 |
FAMILY |
1.8e-36 |
1-157 |
| HMMPanther |
PTHR15907:SF2 |
SUBFAMILY |
1.8e-36 |
1-157 |
- Wolf-PSORT
Lj3g3v0257300.1 cyto 4, nucl 3, extr 3, mito 2, nucl_plas 2, cyto_pero 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0257300.1 |
|