Miyakogusa Predicted Gene

Lj3g3v0247270.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MCR0_SOYBN 1231 91.7 94.7 (tr|I1MCR0) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G79840.1 878 65.8 79.4 | Symbols: GL2 | HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain | chr1:30037526-30041013 FORWARD LENGTH=747
Medicago Medtr2g101720.1 1196 88.5 94.1 | homeobox leucine zipper protein | HC | chr2:43763177-43770055 | 20130731
Soybean Glyma15g01960.1 1231 91.7 94.7  
LJGI gnl|LJGI|TC79317 1241 99.5 99.5 homologue to UniRef100_A7P7A6 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (30%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0247270.1 length: 641 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00046 Homeobox 7.4e-15 1-42
HMMSmart SM00389 Homeodomain 2.2e-06 1-48
ProfileScan PS50071 HOMEOBOX_2 16.115 1-44
IPR002913 START domain
HMMPfam PF01852 START 8.2e-68 159-380
HMMSmart SM00234 in 1.1e-70 156-380
ProfileScan PS50848 START 39.183 147-383
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 3.7e-14 1-52
superfamily SSF46689 Homeodomain-like 5.7e-14 1-59
IPR017970 Homeobox, conserved site
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
PatternScan PS00027 HOMEOBOX_1 NA 19-42
no_ID  
Coil coil coiled-coil NA 43-71
94-115
HMMPanther PTHR24325 FAMILY 1e-278 1-641
HMMPanther PTHR24325:SF0 SUBFAMILY 1e-278 1-641
superfamily SSF55961 Bet 2.3e-13 147-381
406-635
Wolf-PSORT
Lj3g3v0247270.1	nucl 9, cyto 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0247270.1