Miyakogusa Predicted Gene

Lj3g3v0237250.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M904_SOYBN 857 79.7 85.4 (tr|K7M904) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G79860.1 633 61.1 71.5 | Symbols: ATROPGEF12, ROPGEF12, MEE64 | RHO guanyl-nucleotide exchange factor 12 | chr1:30042172-30044092 REVERSE LENGTH=515
Medicago Medtr2g101830.1 839 77.1 83.4 | RHO guanyl-nucleotide exchange factor | HC | chr2:43813630-43810264 | 20130731
Soybean Glyma13g43380.1 827 77.9 84.9  
LJGI gnl|LJGI|BP031215 462 99.6 99.6 similar to UniRef100_A7PEN0 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0237250.1 length: 539 aa.
IPR005512 Plant specific Rop nucleotide exchanger, PRONE
method AccNumber shortName E-value location
Molecular Function GO:0005089 Rho guanyl-nucleotide exchange factor activity    
HMMPfam PF03759 PRONE 1.8e-181 88-439
ProfileScan PS51334 PRONE 114.299 80-445
no_ID  
Coil coil coiled-coil NA 72-104
HMMPanther PTHR32372 FAMILY 4e-275 33-538
HMMPanther PTHR32372:SF0 SUBFAMILY 4e-275 33-538
Seg seg seg NA 68-85
220-238
Wolf-PSORT
Lj3g3v0237250.1	nucl 7.5, cyto_nucl 7, cyto 5.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0237250.1