Miyakogusa Predicted Gene
- Lj3g3v0180790.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7M3U6_SOYBN |
217 |
57.4 |
71.3 |
(tr|K7M3U6) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G52330.1 |
169 |
47.4 |
66.1 |
| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr1:19488962-19489763 FORWARD LENGTH=214 |
| Medicago |
Medtr2g102080.1 |
216 |
65.2 |
78.7 |
| late embryogenesis abundant protein | HC | chr2:43926025-43927347 | 20130731 |
| Soybean |
Glyma13g43610.1 |
170 |
58.7 |
73.3 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0180790.1 |
length: 199 aa. |
| IPR004864 |
Late embryogenesis abundant protein, LEA-14 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03168 |
LEA_2 |
2.6e-06 |
82-175 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
54-66 |
- Wolf-PSORT
Lj3g3v0180790.1 mito 5.5, cyto_mito 3.5, chlo 3, cyto 3, vacu 1, E.R. 1, E.R._vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0180790.1 |
|