Miyakogusa Predicted Gene
- Lj3g3v0140670.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S5E4_LOTJA |
302 |
99.3 |
100.0 |
(tr|I3S5E4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G79990.1 |
248 |
72.7 |
84.0 |
| Symbols: | structural molecules | chr1:30084522-30091949 FORWARD LENGTH=1135 |
| Medicago |
Medtr4g011980.3 |
220 |
81.6 |
90.1 |
| integral membrane protein S (TGN-related) | HC | chr4:3183132-3180193 | 20130731 |
| Soybean |
Glyma08g22110.1 |
255 |
80.3 |
90.8 |
|
| LJGI |
gnl|LJGI|TC65029 |
902 |
99.8 |
99.8 |
weakly similar to UniRef100_A9TMZ9 Cluster: Predicted protein; n=1; Physcomitrella patens subsp. patens|Rep: Predicted protein - Physcomitrella patens subsp. patens, partial (72%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0140670.1 |
length: 152 aa. |
| IPR019185 |
Integral membrane protein SYS1-related |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF09801 |
SYS1 |
3.3e-46 |
5-145 |
| no_ID |
|
| HMMPanther |
PTHR12952 |
SYS1 |
5.1e-57 |
1-150 |
- Wolf-PSORT
Lj3g3v0140670.1 vacu 6, plas 3, chlo 2, E.R. 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0140670.1 |
|