Miyakogusa Predicted Gene

Lj3g3v0139460.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M5N0_SOYBN 562 74.4 80.4 (tr|I1M5N0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G80420.3 322 46.9 61.1 | Symbols: ATXRCC1 | BRCT domain-containing DNA repair protein | chr1:30235444-30237163 REVERSE LENGTH=353
Medicago Medtr2g102430.1 528 71.4 79.7 | BRCT domain DNA repair protein | HC | chr2:44111723-44118272 | 20130731
Soybean Glyma13g43750.1 562 74.4 80.4  
LJGI gnl|LJGI|FS344451 1189 100.0 100.0 similar to UniRef100_A7P7G8 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (30%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0139460.1 length: 389 aa.
IPR001357 BRCT domain
method AccNumber shortName E-value location
Gene3D G3DSA:3.40.50.10190 no description 9.8e-20 77-165
HMMPfam PF00533 BRCT 4.8e-09 78-150
HMMSmart SM00292 breast 1.6e-07 78-154
ProfileScan PS50172 BRCT 17.095 76-164
superfamily SSF52113 BRCT 2e-21 76-170
no_ID  
HMMPanther PTHR11370 DNA-REPAIR 9.5e-69 77-389
HMMPanther PTHR11370:SF0 SUBFAMILY 9.5e-69 77-389
Seg seg seg NA 61-76
178-191
Wolf-PSORT
Lj3g3v0139460.1	nucl 12.5, cyto_nucl 7
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0139460.1