Miyakogusa Predicted Gene

Lj3g3v0139420.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M5N3_SOYBN 684 78.9 84.9 (tr|I1M5N3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G80400.1 448 51.2 65.8 | Symbols: | RING/U-box superfamily protein | chr1:30225864-30227360 FORWARD LENGTH=407
Medicago Medtr1g011380.1 412 55.2 70.4 | zinc finger, C3HC4 type (RING finger) protein | HC | chr1:2002136-1996826 | 20130731
Soybean Glyma13g43770.1 684 78.9 84.9  
LJGI gnl|LJGI|TC77682 1556 99.6 99.6 similar to UniRef100_A7P7H0 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (50%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0139420.1 length: 415 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 1e-15 362-405
HMMSmart SM00184 Ring 7.5e-07 363-403
ProfileScan PS50089 ZF_RING_2 12.548 363-404
IPR011016 Zinc finger, RING-CH-type
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00744 The 0.0048 362-404
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 4.5e-18 359-407
no_ID  
HMMPanther PTHR14155 RING 7.3e-116 32-408
HMMPanther PTHR14155:SF24 OS05G0526600 7.3e-116 32-408
Seg seg seg NA 75-90
175-187
superfamily SSF57850 RING/U-box 5.4e-20 353-410
Wolf-PSORT
Lj3g3v0139420.1	plas 6, E.R. 3, cysk_plas 3, mito_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0139420.1