Miyakogusa Predicted Gene
- Lj3g3v0129350.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
B0BL94_LOTJA |
516 |
99.6 |
99.6 |
(tr|B0BL94) CM0216.490.nc protein OS=Lotus japonicus GN=CM0216.490.nc PE=4 SV=1 |
| TAIR_pep |
AT4G39080.1 |
360 |
69.0 |
83.7 |
| Symbols: VHA-A3 | vacuolar proton ATPase A3 | chr4:18209513-18214752 FORWARD LENGTH=821 |
| Medicago |
Medtr4g071070.1 |
479 |
90.3 |
94.6 |
| vacuolar proton ATPase a3-like protein | HC | chr4:26777805-26767130 | 20130731 |
| Soybean |
Glyma12g04330.1 |
462 |
88.7 |
92.6 |
|
| LJGI |
gnl|LJGI|TC59660 |
1487 |
99.6 |
99.6 |
UniRef100_Q70I37 Cluster: Vacuolar proton-ATPase subunit-like protein; n=1; Lotus japonicus|Rep: Vacuolar proton-ATPase subunit-like protein - Lotus japonicus, complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0129350.1 |
length: 257 aa. |
| IPR002490 |
ATPase, V0 complex, subunit 116kDa |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0015078 |
hydrogen ion transmembrane transporter activity |
|
|
| Biological Process |
GO:0015991 |
ATP hydrolysis coupled proton transport |
|
|
| Cellular Component |
GO:0033179 |
proton-transporting V-type ATPase, V0 domain |
|
|
| HMMPanther |
PTHR11629 |
VACUOLAR |
4.3e-127 |
1-257 |
| HMMPfam |
PF01496 |
V_ATPase_I |
9.1e-43 |
14-255 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
19-47 |
| HMMPanther |
PTHR11629:SF11 |
VACUOLAR |
4.3e-127 |
1-257 |
- Wolf-PSORT
Lj3g3v0129350.1 cyto_nucl 6.66667, cyto 5, nucl 4, nucl_plas 3.83333, cyto_pero 3.83333
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0129350.1 |
|