Miyakogusa Predicted Gene

Lj3g3v0129230.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SBK2_LOTJA 926 93.8 94.0 (tr|I3SBK2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G15570.1 419 52.4 64.7 | Symbols: CYCA2;3 | CYCLIN A2;3 | chr1:5363034-5365218 FORWARD LENGTH=450
Medicago Medtr2g102520.1 608 66.7 74.8 | carboxy-terminal domain cyclin | HC | chr2:44171841-44168809 | 20130731
Soybean Glyma08g22200.1 620 67.0 75.5  
LJGI gnl|LJGI|TC61650 1110 100.0 100.0 weakly similar to UniRef100_Q941M7 Cluster: Cyclin A2; n=1; Medicago sativa|Rep: Cyclin A2 - Medicago sativa (Alfalfa), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0129230.1 length: 481 aa.
IPR004367 Cyclin, C-terminal domain
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
HMMPfam PF02984 Cyclin_C 6e-33 351-473
IPR006671 Cyclin, N-terminal
HMMPfam PF00134 Cyclin_N 8.3e-40 224-348
IPR013763 Cyclin-like
Gene3D G3DSA:1.10.472.10 no description 2.2e-40 239-342
343-476
HMMSmart SM00385 domain 7e-22 258-342
355-443
superfamily SSF47954 Cyclin-like 8.6e-38 212-348
350-479
IPR014400 Cyclin A/B/D/E
Biological Process GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity    
Molecular Function GO:0019901 protein kinase binding    
Biological Process GO:0051726 regulation of cell cycle    
HMMPIR PIRSF001771 Cyclin, 1e-127 15-481
no_ID  
HMMPanther PTHR10177 CYCLINE 2.9e-184 198-481
HMMPanther PTHR10177:SF99 SUBFAMILY 2.9e-184 198-481
Seg seg seg NA 16-28
373-387
Wolf-PSORT
Lj3g3v0129230.1	nucl 8, chlo 1, mito 1, E.R. 1, pero 1, cysk 1, golg 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0129230.1 Not targeted -30.551 -1.615 -11.454 31.69% -17.482