Miyakogusa Predicted Gene
- Lj3g3v0115940.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IMH7_MEDTR |
236 |
82.4 |
93.0 |
(tr|G7IMH7) Cytochrome c oxidase subunit 5B OS=Medicago truncatula GN=MTR_2g103150 PE=1 SV=1 |
| TAIR_pep |
AT1G80230.1 |
178 |
58.9 |
72.2 |
| Symbols: | Rubredoxin-like superfamily protein | chr1:30169784-30170999 REVERSE LENGTH=171 |
| Medicago |
Medtr2g103150.1 |
236 |
82.4 |
93.0 |
| cytochrome C oxidase subunit 5b | HC | chr2:44414137-44418994 | 20130731 |
| Soybean |
Glyma13g43980.2 |
211 |
76.3 |
82.7 |
|
| LJGI |
gnl|LJGI|TC72086 |
775 |
100.0 |
100.0 |
similar to UniRef100_Q0KKQ3 Cluster: Cytochrome c oxidase subunit Vb; n=1; Pisum sativum|Rep: Cytochrome c oxidase subunit Vb - Pisum sativum (Garden pea), partial (86%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0115940.1 |
length: 152 aa. |
| IPR002124 |
Cytochrome c oxidase, subunit Vb |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004129 |
cytochrome-c oxidase activity |
|
|
| Cellular Component |
GO:0005740 |
mitochondrial envelope |
|
|
| BlastProDom |
PD007270 |
Q8LBW7_ARATH_Q8LBW7; |
2e-34 |
56-136 |
| Gene3D |
G3DSA:2.60.11.10 |
no description |
1.3e-40 |
46-142 |
| HMMPanther |
PTHR10122 |
CYTOCHROME |
1.7e-47 |
2-152 |
| HMMPfam |
PF01215 |
COX5B |
1.8e-22 |
56-144 |
| ProfileScan |
PS51359 |
COX5B_2 |
22.174 |
44-143 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
140-152 |
| superfamily |
SSF57802 |
Rubredoxin-like |
1.3e-35 |
44-143 |
- Wolf-PSORT
Lj3g3v0115940.1 mito 6, chlo 5, cyto 3, cyto_mito 3, mito_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0115940.1 |
|