| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | M5VR75_PRUPE | 602 | 92.3 | 94.6 | (tr|M5VR75) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008972mg PE=4 SV=1 |
| TAIR_pep | AT3G10330.1 | 584 | 89.4 | 92.9 | | Symbols: | Cyclin-like family protein | chr3:3199907-3201642 FORWARD LENGTH=312 |
| Medicago | Medtr7g091230.1 | 590 | 90.7 | 93.6 | | transcription initiation factor IIB | HC | chr7:36014917-36009852 | 20130731 |
| Soybean | Glyma10g15700.1 | 589 | 91.4 | 92.7 | |
| LJGI | gnl|LJGI|TC66310 | 747 | 91.0 | 91.0 | homologue to UniRef100_P48513 Cluster: Transcription initiation factor IIB; n=1; Glycine max|Rep: Transcription initiation factor IIB - Glycine max (Soybean), partial (62%) |
| Lj3g3v0095850.1 | length: 312 aa. | |||
| IPR000812 | Transcription factor TFIIB | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Biological Process | GO:0006352 | DNA-dependent transcription, initiation | ||
| Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| FPrintScan | PR00685 | TIFACTORIIB | 1.7e-67 | 19-39 41-54 55-76 152-171 179-194 212-230 244-260 276-290 |
| HMMPanther | PTHR11618 | TRANSCRIPTION | 2.5e-133 | 1-312 |
| IPR013137 | Zinc finger, TFIIB-type | |||
| Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMPfam | PF08271 | TF_Zn_Ribbon | 8.9e-15 | 6-47 |
| ProfileScan | PS51134 | ZF_TFIIB | 9.165 | 1-34 |
| IPR013150 | Transcription factor TFIIB, cyclin-like domain | |||
| Molecular Function | GO:0017025 | TBP-class protein binding | ||
| HMMPfam | PF00382 | TFIIB | 1.5e-08 | 112-176 213-281 |
| IPR013763 | Cyclin-like | |||
| Gene3D | G3DSA:1.10.472.10 | no description | 3.9e-23 | 108-210 211-299 |
| HMMSmart | SM00385 | domain | 4.3e-07 | 110-192 211-290 |
| superfamily | SSF47954 | Cyclin-like | 1.3e-22 | 206-312 104-197 |
| IPR023486 | Transcription factor TFIIB, conserved site | |||
| PatternScan | PS00782 | TFIIB | NA | 144-159 |
| no_ID | ||||
| Gene3D | G3DSA:2.20.25.10 | no description | 1.1e-19 | 4-50 |
| Seg | seg | seg | NA | 225-236 |
| superfamily | SSF57783 | Zinc | 2.2e-13 | 4-51 |
Lj3g3v0095850.1 nucl 5, chlo 4, cyto_nucl 4
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj3g3v0095850.1 | Not targeted | -24.129 | -0.114 | -3.026 | 19.22% | -20.989 |