Miyakogusa Predicted Gene
- Lj3g3v0042050.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7ZYQ8_MEDTR |
244 |
55.6 |
61.3 |
(tr|G7ZYQ8) Kelch-like protein OS=Medicago truncatula GN=MTR_077s0020 PE=4 SV=1 |
| TAIR_pep |
AT3G61600.2 |
234 |
53.0 |
60.2 |
| Symbols: ATPOB1, POB1 | POZ/BTB containin G-protein 1 | chr3:22795704-22798069 FORWARD LENGTH=561 |
| Medicago |
Medtr8g028190.1 |
244 |
55.6 |
61.3 |
| BTB/POZ domain protein POB1 | HC | chr8:10528673-10524289 | 20130731 |
| Soybean |
Glyma19g44170.1 |
244 |
55.9 |
63.3 |
|
| LJGI |
gnl|LJGI|TC78370 |
1195 |
100.0 |
100.0 |
similar to UniRef100_O82343 Cluster: Expressed protein; n=1; Arabidopsis thaliana|Rep: Expressed protein - Arabidopsis thaliana (Mouse-ear cress), partial (43%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0042050.1 |
length: 201 aa. |
| IPR000210 |
BTB/POZ-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMSmart |
SM00225 |
Broad-Complex, |
1.7e-06 |
63-163 |
| ProfileScan |
PS50097 |
BTB |
13.074 |
63-132 |
| IPR011333 |
BTB/POZ fold |
| Gene3D |
G3DSA:3.30.710.10 |
no description |
1.2e-16 |
71-154 |
| superfamily |
SSF54695 |
POZ |
1.6e-09 |
68-158 |
| IPR013069 |
BTB/POZ |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00651 |
BTB |
6.2e-12 |
69-153 |
| no_ID |
|
| HMMPanther |
PTHR24412 |
FAMILY |
2.2e-58 |
30-197 |
| HMMPanther |
PTHR24412:SF93 |
SUBFAMILY |
2.2e-58 |
30-197 |
- Wolf-PSORT
Lj3g3v0042050.1 nucl 7, cyto 2, chlo 1, mito 1, plas 1, cysk 1, chlo_mito 1, E.R._vacu 1, cyto_pero 1, cysk_plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0042050.1 |
|