Miyakogusa Predicted Gene
- Lj3g3v0042020.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MKP3_SOYBN |
460 |
51.7 |
61.6 |
(tr|I1MKP3) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G61600.2 |
431 |
55.7 |
67.6 |
| Symbols: ATPOB1, POB1 | POZ/BTB containin G-protein 1 | chr3:22795704-22798069 FORWARD LENGTH=561 |
| Medicago |
Medtr8g028190.1 |
444 |
50.3 |
59.4 |
| BTB/POZ domain protein POB1 | HC | chr8:10528673-10524289 | 20130731 |
| Soybean |
Glyma16g03260.1 |
460 |
51.7 |
61.6 |
|
| LJGI |
gnl|LJGI|FS361599 |
1294 |
99.1 |
99.1 |
weakly similar to UniRef100_O82343 Cluster: Expressed protein; n=1; Arabidopsis thaliana|Rep: Expressed protein - Arabidopsis thaliana (Mouse-ear cress), partial (31%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0042020.1 |
length: 427 aa. |
| IPR000210 |
BTB/POZ-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| ProfileScan |
PS50097 |
BTB |
13.467 |
48-125 |
| IPR011333 |
BTB/POZ fold |
| Gene3D |
G3DSA:3.30.710.10 |
no description |
3.6e-15 |
64-147 |
| superfamily |
SSF54695 |
POZ |
2.1e-08 |
61-151 |
| IPR013069 |
BTB/POZ |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00651 |
BTB |
5.3e-11 |
62-135 |
| no_ID |
|
| HMMPanther |
PTHR24412 |
FAMILY |
5.1e-93 |
23-294 |
| HMMPanther |
PTHR24412:SF93 |
SUBFAMILY |
5.1e-93 |
23-294 |
- Wolf-PSORT
Lj3g3v0042020.1 nucl 4.5, chlo 4, plas 3, cysk_nucl 3, cyto 1, E.R. 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0042020.1 |
|