Miyakogusa Predicted Gene
- Lj3g3v0041900.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IIA0_MEDTR |
370 |
86.4 |
91.3 |
(tr|G7IIA0) Sodium-coupled neutral amino acid transporter OS=Medicago truncatula GN=MTR_2g104180 PE=4 SV=1 |
| TAIR_pep |
AT1G80510.1 |
335 |
75.4 |
87.7 |
| Symbols: | Transmembrane amino acid transporter family protein | chr1:30273100-30274569 FORWARD LENGTH=489 |
| Medicago |
Medtr2g104180.1 |
374 |
86.1 |
91.4 |
| transmembrane amino acid transporter family protein | HC | chr2:44892100-44893563 | 20130731 |
| Soybean |
Glyma13g44450.1 |
355 |
86.1 |
92.3 |
|
| LJGI |
gnl|LJGI|FS359758 |
682 |
98.9 |
98.9 |
similar to UniRef100_A7Q8X6 Cluster: Chromosome chr9 scaffold_65, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_65, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0041900.1 |
length: 210 aa. |
| IPR013057 |
Amino acid transporter, transmembrane |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF01490 |
Aa_trans |
1.7e-30 |
4-198 |
| no_ID |
|
| HMMPanther |
PTHR22950 |
AMINO |
2e-50 |
1-210 |
| HMMPanther |
PTHR22950:SF9 |
SUBFAMILY |
2e-50 |
1-210 |
| Seg |
seg |
seg |
NA |
191-200 |
- Wolf-PSORT
Lj3g3v0041900.1 plas 8, chlo 2, golg 2, vacu 1, E.R. 1, chlo_mito 1, E.R._vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0041900.1 |
|