Miyakogusa Predicted Gene

Lj3g3v0030810.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL G7IMA1_MEDTR 382 58.3 68.9 (tr|G7IMA1) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_2g104430 PE=4 SV=1

TAIR_pep AT1G15780.1 234 58.8 70.4 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). | chr1:5430446-5435921 REVERSE LENGTH=1335

Medicago Medtr2g104430.3 381 58.3 68.9 | transcription cofactor, putative | LC | chr2:44985220-44977384 | 20130731

Soybean Glyma13g44470.1 330 77.7 85.8

LJGI gnl|LJGI|TC81078 860 92.2 92.2 similar to UniRef100_Q8H6Q7 Cluster: CTV.22; n=1; Poncirus trifoliata|Rep: CTV.22 - Poncirus trifoliata (Hardy orange), partial (16%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v0030810.1 length: 458 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 220-231

Wolf-PSORT

Lj3g3v0030810.1 chlo 8, nucl 5

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v0030810.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	G7IMA1_MEDTR	382	58.3	68.9	(tr\|G7IMA1) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_2g104430 PE=4 SV=1
TAIR_pep	AT1G15780.1	234	58.8	70.4	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). \| chr1:5430446-5435921 REVERSE LENGTH=1335
Medicago	Medtr2g104430.3	381	58.3	68.9	\| transcription cofactor, putative \| LC \| chr2:44985220-44977384 \| 20130731
Soybean	Glyma13g44470.1	330	77.7	85.8
LJGI	gnl\|LJGI\|TC81078	860	92.2	92.2	similar to UniRef100_Q8H6Q7 Cluster: CTV.22; n=1; Poncirus trifoliata\|Rep: CTV.22 - Poncirus trifoliata (Hardy orange), partial (16%)

no_ID
Lj3g3v0030810.1				length: 458 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	220-231