Miyakogusa Predicted Gene

Lj3g3v0030650.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IMC1_MEDTR 697 84.3 90.0 (tr|G7IMC1) 3-isopropylmalate dehydrogenase OS=Medicago truncatula GN=MTR_2g104610 PE=3 SV=1
TAIR_pep AT1G80560.1 647 77.1 87.0 | Symbols: ATIMD2, IMD2 | isopropylmalate dehydrogenase 2 | chr1:30287833-30290126 FORWARD LENGTH=405
Medicago Medtr2g104610.1 697 84.3 90.0 | 3-isopropylmalate dehydrogenase | HC | chr2:45066714-45072636 | 20130731
Soybean Glyma13g44490.1 655 79.7 88.0  
LJGI gnl|LJGI|TC63238 2416 99.8 99.8 similar to UniRef100_P29102 Cluster: 3-isopropylmalate dehydrogenase, chloroplast precursor; n=1; Brassica napus|Rep: 3-isopropylmalate dehydrogenase, chloroplast precursor - Brassica napus (Rape), partial (92%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0030650.1 length: 408 aa.
IPR001804 Isocitrate and isopropylmalate dehydrogenases family
method AccNumber shortName E-value location
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Molecular Function GO:0051287 NAD binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPanther PTHR11835 DECARBOXYLATING 9.7e-190 32-403
IPR004429 Isopropylmalate dehydrogenase
Molecular Function GO:0003862 3-isopropylmalate dehydrogenase activity    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0009098 leucine biosynthetic process    
Biological Process GO:0055114 oxidation-reduction process    
HAMAP MF_01033 LeuB_type1 49.467 45-399
HMMTigr TIGR00169 leuB: 1.1e-152 47-395
IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Molecular Function GO:0051287 NAD binding    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00470 IDH_IMDH NA 286-305
IPR024084 Isopropylmalate dehydrogenase-like domain
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:3.40.718.10 no description 3.8e-127 40-398
HMMPfam PF00180 Iso_dh 3.1e-134 47-395
no_ID  
HMMPanther PTHR11835:SF1 ISOCITRATE 9.7e-190 32-403
superfamily SSF53659 Isocitrate/Isopropylmalate 1.1e-120 44-402
Wolf-PSORT
Lj3g3v0030650.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0030650.1