Miyakogusa Predicted Gene

Lj3g3v0030640.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MCC9_SOYBN 731 79.8 86.8 (tr|I1MCC9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G26000.2 580 63.2 78.2 | Symbols: BRIZ2 | zinc finger (C3HC4-type RING finger) family protein | chr2:11082403-11085137 FORWARD LENGTH=479
Medicago Medtr2g104600.1 636 76.4 81.4 | zinc finger, C3HC4 type (RING finger) protein | HC | chr2:45076840-45081476 | 20130731
Soybean Glyma15g00770.2 731 79.8 86.8  
LJGI gnl|LJGI|TC58274 1501 100.0 100.0 similar to UniRef100_A7QCT0 Cluster: Chromosome undetermined scaffold_79, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_79, whole genome shotgun sequence - Vitis vinifera (Grape), partial (47%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0030640.1 length: 467 aa.
IPR001607 Zinc finger, UBP-type
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF02148 zf-UBP 2.5e-18 219-278
HMMSmart SM00290 Ubiquitin 2.1e-22 218-267
ProfileScan PS50271 ZF_UBP 19.654 217-278
IPR001841 Zinc finger, RING-type
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 1.8e-09 167-208
HMMSmart SM00184 Ring 7e-07 168-207
ProfileScan PS50089 ZF_RING_2 13.065 168-208
IPR011422 BRCA1-associated 2
BlastProDom PD017029 O80996_ARATH_O80996; 2e-43 31-157
HMMPfam PF07576 BRAP2 1.6e-28 60-157
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 2.7e-23 155-197
198-293
no_ID  
Coil coil coiled-coil NA 333-354
370-398
406-427
HMMPanther PTHR24007 FAMILY 7.6e-155 1-454
Seg seg seg NA 13-30
46-56
300-307
superfamily SSF57850 RING/U-box 3.4e-14 127-214
Wolf-PSORT
Lj3g3v0030640.1	nucl 7, cyto 4, chlo 1, extr 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0030640.1