Miyakogusa Predicted Gene

Lj3g3v0028550.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T8Y2_LOTJA 249 86.4 87.9 (tr|I3T8Y2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G26695.1 192 63.8 76.1 | Symbols: | Ran BP2/NZF zinc finger-like superfamily protein | chr2:11365275-11365789 FORWARD LENGTH=138
Medicago Medtr4g113840.1 224 74.3 82.1 | zinc finger (Ran-binding) family protein | HC | chr4:46857090-46858933 | 20130731
Soybean Glyma06g24770.1 214 70.7 80.7  
LJGI gnl|LJGI|GO025762 844 100.0 100.0 similar to UniRef100_Q6Z6E6 Cluster: Zinc finger transcription factor ZFP30; n=1; Oryza sativa Japonica Group|Rep: Zinc finger transcription factor ZFP30 - Oryza sativa subsp. japonica (Rice), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0028550.1 length: 140 aa.
IPR001876 Zinc finger, RanBP2-type
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.1060.10 no description 3.5e-14 2-31
44-78
102-135
HMMPfam PF00641 zf-RanBP 1.4e-07 49-76
105-133
HMMSmart SM00547 Zinc 1.7e-07 6-30
50-76
107-133
PatternScan PS01358 ZF_RANBP2_1 NA 8-27
52-73
109-130
ProfileScan PS50199 ZF_RANBP2_2 9.755 4-33
48-79
105-136
no_ID  
HMMPanther PTHR23111 ZINC 1.2e-33 6-137
Seg seg seg NA 80-96
superfamily SSF90209 Ran 5.3e-06 95-139
38-82
1-36
Wolf-PSORT
Lj3g3v0028550.1	chlo 4, nucl 4, mito 3, cyto_nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0028550.1