Miyakogusa Predicted Gene

Lj3g3v0014470.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6T5S0_SOYBN 231 61.1 64.7 (tr|C6T5S0) Uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT5G25190.1 149 45.6 52.7 | Symbols: | Integrase-type DNA-binding superfamily protein | chr5:8707007-8707655 REVERSE LENGTH=181
Medicago Medtr4g008860.1 192 52.8 55.8 | ethylene response factor | HC | chr4:1725344-1727163 | 20130731
Soybean Glyma07g02930.1 231 61.1 64.7  
LJGI gnl|LJGI|TC57807 301 87.9 87.9 homologue to UniRef100_A7P5Z2 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (63%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0014470.1 length: 184 aa.
IPR001471 AP2/ERF domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 2.9e-11 8-19
30-46
Gene3D G3DSA:3.30.730.10 no description 2.2e-33 7-64
HMMPfam PF00847 AP2 6.2e-16 7-56
HMMSmart SM00380 DNA-binding 6.3e-40 7-70
ProfileScan PS51032 AP2_ERF 21.074 7-64
IPR016177 DNA-binding, integrase-type
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 2.1e-22 6-67
no_ID  
HMMPanther PTHR31194 SHN 1.7e-35 2-69
HMMPanther PTHR31194:SF0 SHN 1.7e-35 2-69
Seg seg seg NA 40-52
71-88
100-109
Wolf-PSORT
Lj3g3v0014470.1	mito 10.5, chlo_mito 6.5, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0014470.1