Miyakogusa Predicted Gene
- Lj3g3v0012340.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SLT2_LOTJA |
119 |
79.2 |
79.2 |
(tr|I3SLT2) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1 |
| TAIR_pep |
AT4G14615.1 |
82.4 |
57.3 |
66.7 |
| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2346 (InterPro:IPR018625); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52825.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:8383842-8384814 FORWARD LENGTH=76 |
| Medicago |
Medtr1g040905.1 |
102 |
68.4 |
73.7 |
| transmembrane protein, putative | HC | chr1:15188043-15190217 | 20130731 |
| Soybean |
Glyma02g00360.1 |
94.4 |
62.3 |
71.4 |
|
| LJGI |
gnl|LJGI|TC57758 |
454 |
99.2 |
99.2 |
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0012340.1 |
length: 77 aa. |
| IPR018625 |
Protein of unknown function DUF2346 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF09803 |
DUF2346 |
0.00016 |
10-74 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
51-65 |
- Wolf-PSORT
Lj3g3v0012340.1 chlo 5, cyto 4, mito 2, cyto_nucl 2, cyto_pero 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0012340.1 |
|