Miyakogusa Predicted Gene
- Lj3g3v0012280.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JXC8_MEDTR |
140 |
52.2 |
69.4 |
(tr|G7JXC8) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_5g012820 PE=4 SV=1 |
| TAIR_pep |
AT5G05210.1 |
82.8 |
38.7 |
56.2 |
| Symbols: | Surfeit locus protein 6 | chr5:1548198-1549534 FORWARD LENGTH=386 |
| Medicago |
Medtr5g012820.3 |
140 |
52.2 |
69.4 |
| surfeit locus protein | HC | chr5:3932253-3931198 | 20130731 |
| Soybean |
Glyma05g15100.1 |
132 |
52.0 |
69.3 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0012280.1 |
length: 169 aa. |
| IPR007019 |
Surfeit locus 6 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR14369 |
SURFEIT |
7e-19 |
57-160 |
| HMMPfam |
PF04935 |
SURF6 |
5e-18 |
22-163 |
| no_ID |
|
| HMMPanther |
PTHR14369:SF0 |
SUBFAMILY |
7e-19 |
57-160 |
| Seg |
seg |
seg |
NA |
81-103 |
- Wolf-PSORT
Lj3g3v0012280.1 nucl 8, cyto 3, mito 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0012280.1 |
|