Miyakogusa Predicted Gene

Lj2g3v3403240.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M634_SOYBN 1475 78.5 85.8 (tr|I1M634) Glutamate receptor OS=Glycine max PE=3 SV=2
TAIR_pep AT4G35290.1 1116 62.1 77.3 | Symbols: GLUR2, GLR3.2, ATGLR3.2, ATGLUR2 | glutamate receptor 2 | chr4:16790290-16793461 FORWARD LENGTH=912
Medicago Medtr3g115910.2 1020 56.3 72.3 | glutamate receptor 3.2 | HC | chr3:54174846-54179813 | 20130731
Soybean Glyma14g00350.1 1444 81.6 88.9  
LJGI gnl|LJGI|TC69253 1065 99.6 99.6 similar to UniRef100_A7P8R9 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3403240.3 length: 935 aa.
IPR001320 Ionotropic glutamate receptor
method AccNumber shortName E-value location
Molecular Function GO:0004970 ionotropic glutamate receptor activity    
Molecular Function GO:0005234 extracellular-glutamate-gated ion channel activity    
Cellular Component GO:0016020 membrane    
HMMPfam PF00060 Lig_chan 3.3e-35 608-853
HMMSmart SM00079 Eukaryotic 1.4e-47 486-825
IPR001638 Extracellular solute-binding protein, family 3
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0030288 outer membrane-bounded periplasmic space    
HMMPfam PF00497 SBP_bac_3 8e-20 508-821
IPR001828 Extracellular ligand-binding receptor
HMMPfam PF01094 ANF_receptor 6.7e-66 67-422
IPR017103 Ionotropic glutamate receptor, plant
HMMPIR PIRSF037090 Ionotropic 0 13-935
no_ID  
Gene3D G3DSA:1.10.287.70 no description 4.9e-31 605-730
Gene3D G3DSA:3.40.190.10 no description 6.9e-26 466-604
Gene3D G3DSA:3.40.50.2300 no description 5.2e-23 312-410
164-311
HMMPanther PTHR18966 IONOTROPIC 0 15-932
HMMPanther PTHR18966:SF7 GLUTAMATE 0 15-932
Seg seg seg NA 19-32
283-296
669-681
superfamily SSF53822 Periplasmic 2.9e-87 41-481
superfamily SSF53850 Periplasmic 1.6e-43 455-828
Wolf-PSORT
Lj2g3v3403240.3	plas 9, E.R. 3, mito 1, pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3403240.3