Miyakogusa Predicted Gene

Lj2g3v3373100.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q9S7B1_LOTJA 1667 92.0 92.0 (tr|Q9S7B1) Nodule inception protein OS=Lotus japonicus GN=nin PE=2 SV=1
TAIR_pep AT2G17150.1 555 40.8 56.9 | Symbols: | Plant regulator RWP-RK family protein | chr2:7467049-7470533 REVERSE LENGTH=909
Medicago Medtr5g099060.1 897 59.1 68.3 | nodule inception protein | HC | chr5:43407481-43411238 | 20130731
Soybean Glyma04g00210.1 733 49.8 57.5  
LJGI gnl|LJGI|TC74887 5109 99.7 99.7 UniRef100_Q9S7B1 Cluster: Nodule inception protein; n=1; Lotus japonicus|Rep: Nodule inception protein - Lotus japonicus, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3373100.1 length: 878 aa.
IPR000270 Phox/Bem1p
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00564 PB1 3.2e-18 781-862
HMMSmart SM00666 PB1 4.4e-28 780-863
IPR003035 RWP-RK domain
HMMPfam PF02042 RWP-RK 1.2e-26 570-621
ProfileScan PS51519 RWP_RK 17.530 560-641
no_ID  
Gene3D G3DSA:3.10.20.240 no description 3.2e-22 779-860
HMMPanther PTHR32002 FAMILY 8.7e-175 79-878
HMMPanther PTHR32002:SF0 SUBFAMILY 8.7e-175 79-878
Seg seg seg NA 9-14
53-64
442-448
462-475
551-567
655-668
superfamily SSF54277 CAD 1.8e-26 767-869
Wolf-PSORT
Lj2g3v3373100.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3373100.1