Miyakogusa Predicted Gene

Lj2g3v3339740.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7K0Q0_MEDTR 1179 81.7 88.6 (tr|G7K0Q0) Phenylalanine ammonia-lyase OS=Medicago truncatula GN=MTR_5g098720 PE=3 SV=1
TAIR_pep AT2G37040.1 1026 69.4 82.5 | Symbols: PAL1, ATPAL1 | PHE ammonia lyase 1 | chr2:15557602-15560237 REVERSE LENGTH=725
Medicago Medtr5g098720.1 1179 81.7 88.6 | phenylalanine ammonia-lyase-like protein | HC | chr5:43214679-43217796 | 20130731
Soybean Glyma02g47940.1 1203 84.4 90.0  
LJGI gnl|LJGI|TC63905 1271 98.9 98.9 similar to UniRef100_P19143 Cluster: Phenylalanine ammonia-lyase class 3; n=1; Phaseolus vulgaris|Rep: Phenylalanine ammonia-lyase class 3 - Phaseolus vulgaris (Kidney bean) (French bean), partial (29%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3339740.1 length: 706 aa.
IPR001106 Aromatic amino acid lyase
method AccNumber shortName E-value location
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0016841 ammonia-lyase activity    
HMMPfam PF00221 Lyase_aromatic 8.3e-167 52-538
IPR005922 Phenylalanine ammonia-lyase
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006559 L-phenylalanine catabolic process    
Molecular Function GO:0016841 ammonia-lyase activity    
HMMTigr TIGR01226 phe_am_lyase: 0 16-697
IPR008948 L-Aspartase-like
Molecular Function GO:0003824 catalytic activity    
superfamily SSF48557 L-aspartase-like 4.1e-248 15-706
IPR022313 Phenylalanine/histidine ammonia-lyases, active site
Molecular Function GO:0016841 ammonia-lyase activity    
PatternScan PS00488 PAL_HISTIDASE NA 190-206
IPR023144 Phenylalanine ammonia-lyase, shielding domain
Gene3D G3DSA:1.10.274.20 no description 5.9e-44 526-641
IPR024083 Fumarase/histidase, N-terminal
Gene3D G3DSA:1.10.275.10 no description 8.7e-84 15-253
no_ID  
Gene3D G3DSA:1.20.200.10 no description 3.1e-129 642-697
HMMPanther PTHR32364 FAMILY 0 1-706
HMMPanther PTHR32364:SF2 SUBFAMILY 0 1-706
Seg seg seg NA 251-264
271-281
Wolf-PSORT
Lj2g3v3339740.1	chlo 3, E.R. 3, nucl 2.5, E.R._plas 2.5, plas 2, chlo_mito 2, cysk_nucl 2, E.R._vacu 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3339740.1