| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1JJU5_SOYBN | 1006 | 75.0 | 81.9 | (tr|I1JJU5) Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=2 |
| TAIR_pep | AT1G57820.1 | 800 | 62.7 | 74.9 | | Symbols: VIM1, ORTH2 | Zinc finger (C3HC4-type RING finger) family protein | chr1:21414342-21417902 REVERSE LENGTH=645 |
| Medicago | Medtr8g102580.1 | 937 | 70.5 | 79.8 | | E3 ubiquitin-protein ligase orthrus-like protein | HC | chr8:43193189-43197470 | 20130731 |
| Soybean | Glyma14g00670.1 | 989 | 75.3 | 81.8 | |
| LJGI | gnl|LJGI|FS333782 | 1185 | 98.6 | 98.6 | similar to UniRef100_A7QT83 Cluster: Chromosome chr1 scaffold_166, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_166, whole genome shotgun sequence - Vitis vinifera (Grape), partial (10%) |
| Lj2g3v3339680.1 | length: 681 aa. | |||
| IPR001841 | Zinc finger, RING-type | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0005515 | protein binding | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMSmart | SM00184 | Ring | 9e-06 | 126-164 497-554 |
| ProfileScan | PS50089 | ZF_RING_2 | 10.262 | 126-165 497-555 |
| IPR001965 | Zinc finger, PHD-type | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMSmart | SM00249 | PHD | 5.6e-05 | 12-56 |
| IPR003105 | SRA-YDG | |||
| Molecular Function | GO:0042393 | histone binding | ||
| Gene3D | G3DSA:2.30.280.10 | no description | 1.8e-65 | 266-439 |
| HMMPfam | PF02182 | YDG_SRA | 7.7e-53 | 252-407 |
| HMMSmart | SM00466 | SET | 2.1e-79 | 250-407 |
| ProfileScan | PS51015 | YDG | 51.394 | 255-403 |
| IPR011011 | Zinc finger, FYVE/PHD-type | |||
| superfamily | SSF57903 | FYVE/PHD | 4.8e-07 | 5-64 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | |||
| Gene3D | G3DSA:3.30.40.10 | no description | 9.9e-17 | 10-58 225-226 482-590 |
| IPR017907 | Zinc finger, RING-type, conserved site | |||
| PatternScan | PS00518 | ZF_RING_1 | NA | 512-521 |
| IPR019786 | Zinc finger, PHD-type, conserved site | |||
| PatternScan | PS01359 | ZF_PHD_1 | NA | 13-55 |
| no_ID | ||||
| HMMPanther | PTHR14140 | E3 | 5e-293 | 5-674 |
| HMMPanther | PTHR14140:SF1 | RING | 5e-293 | 5-674 |
| HMMPfam | PF13923 | zf-C3HC4_2 | 4.9e-07 | 125-166 494-556 |
| Seg | seg | seg | NA | 182-193 |
| superfamily | SSF57850 | RING/U-box | 1.5e-12 | 119-186 474-595 |
Lj2g3v3339680.1 nucl 14
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj2g3v3339680.1 |