Miyakogusa Predicted Gene

Lj2g3v3339650.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M662_SOYBN 1690 81.2 88.4 (tr|I1M662) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G09950.1 1235 62.1 76.7 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:3102877-3105864 REVERSE LENGTH=995
Medicago Medtr4g113240.1 1672 81.7 88.9 | pentatricopeptide (PPR) repeat protein | HC | chr4:46542320-46539266 | 20130731
Soybean Glyma14g00690.1 1565 80.4 86.9  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3339650.1 length: 1028 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.06 72-99
101-130
284-308
620-649
693-719
HMMPfam PF13041 PPR_2 3.9e-11 202-254
413-460
719-766
HMMTigr TIGR00756 PPR: 1.3e-07 101-134
206-232
388-416
416-449
721-754
ProfileScan PS51375 PPR 6.171 99-133
68-98
203-237
171-202
279-313
414-448
383-413
515-550
484-514
618-652
586-616
719-753
688-718
653-687
754-784
790-820
859-893
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 9e-05 852-882
no_ID  
HMMPanther PTHR24015 FAMILY 0 53-1028
HMMPanther PTHR24015:SF45 SUBFAMILY 0 53-1028
HMMPfam PF14432 DYW_deaminase 1.7e-19 905-1017
Seg seg seg NA 17-31
449-463
Wolf-PSORT
Lj2g3v3339650.1	chlo 11, nucl 1, cyto 1, mito 1, cyto_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3339650.1