Miyakogusa Predicted Gene

Lj2g3v3339130.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JXB2_MEDTR 213 38.3 53.7 (tr|G7JXB2) F-box/LRR-repeat protein OS=Medicago truncatula GN=MTR_5g058100 PE=4 SV=1
TAIR_pep AT5G60610.1 116 28.5 44.1 | Symbols: | F-box/RNI-like superfamily protein | chr5:24364049-24365386 FORWARD LENGTH=388
Medicago Medtr7g055943.1 215 38.0 54.5 | F-box/RNI/FBD-like domain protein | LC | chr7:19318006-19316445 | 20130731
Soybean Glyma08g46320.1 179 32.4 49.1  
LJGI gnl|LJGI|DC599923 904 100.0 100.0 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_111, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3339130.1 length: 418 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 2.6e-05 7-40
ProfileScan PS50181 FBOX 9.550 4-40
superfamily SSF81383 F-box 3.4e-10 2-40
IPR006566 FBD
HMMPfam PF08387 FBD 2.2e-13 303-352
HMMSmart SM00579 domain 0.0004 311-384
no_ID  
Gene3D G3DSA:3.80.10.10 no description 2.1e-15 5-281
HMMPanther PTHR32484 FAMILY 7e-30 5-381
superfamily SSF52047 RNI-like 9.6e-10 58-290
Wolf-PSORT
Lj2g3v3339130.1	nucl 11, cyto 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3339130.1 Not targeted -69.330 -23.700 -11.416 95.64% -34.214