Miyakogusa Predicted Gene

Lj2g3v3339010.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M687_SOYBN 716 77.4 80.5 (tr|I1M687) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G07810.1 483 75.9 84.4 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:2492875-2495052 FORWARD LENGTH=494
Medicago Medtr5g097580.1 691 74.8 78.8 | RNA-binding (RRM/RBD/RNP motif) family protein | HC | chr5:42749843-42754792 | 20130731
Soybean Glyma14g00970.1 716 77.4 80.5  
LJGI gnl|LJGI|TC58641 133 81.7 81.7 similar to UniRef100_A7R1X0 Cluster: Chromosome undetermined scaffold_383, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_383, whole genome shotgun sequence - Vitis vinifera (Grape), partial (58%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3339010.2 length: 478 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 1.5e-17 8-69
108-174
HMMSmart SM00360 RNA 8.6e-24 7-78
107-179
ProfileScan PS50102 RRM 17.677 6-82
106-183
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 3.2e-24 3-86
98-189
no_ID  
HMMPanther PTHR24012 FAMILY 9.1e-140 1-439
HMMPanther PTHR24012:SF27 SUBFAMILY 9.1e-140 1-439
Seg seg seg NA 261-270
298-309
334-353
358-397
superfamily SSF54928 RNA-binding 1.2e-25 91-202
4-104
Wolf-PSORT
Lj2g3v3339010.2	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3339010.2