Miyakogusa Predicted Gene
- Lj2g3v3339000.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1M688_SOYBN |
1091 |
81.5 |
89.4 |
(tr|I1M688) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G48130.1 |
660 |
54.2 |
69.6 |
| Symbols: | Phototropic-responsive NPH3 family protein | chr5:19516291-19518450 FORWARD LENGTH=625 |
| Medicago |
Medtr5g015790.1 |
250 |
34.3 |
54.1 |
| phototropic-responsive NPH3 family protein | HC | chr5:5529081-5534660 | 20130731 |
| Soybean |
Glyma14g00980.1 |
1091 |
81.5 |
89.4 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v3339000.1 |
length: 668 aa. |
| IPR000210 |
BTB/POZ-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMSmart |
SM00225 |
Broad-Complex, |
2.2e-05 |
40-128 |
| ProfileScan |
PS50097 |
BTB |
11.833 |
40-104 |
| IPR011333 |
BTB/POZ fold |
| Gene3D |
G3DSA:3.30.710.10 |
no description |
2.9e-09 |
42-129 |
| superfamily |
SSF54695 |
POZ |
5.6e-13 |
15-131 |
| IPR013069 |
BTB/POZ |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00651 |
BTB |
7.5e-06 |
41-130 |
| IPR027356 |
NPH3 domain |
| HMMPfam |
PF03000 |
NPH3 |
2.3e-60 |
213-458 |
| ProfileScan |
PS51649 |
NPH3 |
67.703 |
213-482 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
558-586 |
| HMMPanther |
PTHR32370 |
FAMILY |
9.8e-153 |
28-498 |
| HMMPanther |
PTHR32370:SF0 |
SUBFAMILY |
9.8e-153 |
28-498 |
| Seg |
seg |
seg |
NA |
4-19 |
- Wolf-PSORT
Lj2g3v3339000.1 nucl 9, chlo 1, cyto 1, plas 1, extr 1, pero 1, cyto_pero 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v3339000.1 |
|