Miyakogusa Predicted Gene

Lj2g3v3338860.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M476_SOYBN 1019 77.5 83.8 (tr|K7M476) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G35750.1 617 55.9 67.1 | Symbols: AHK2, HK2 | histidine kinase 2 | chr5:13911743-13916337 REVERSE LENGTH=1176
Medicago Medtr5g097410.1 928 73.6 80.8 | cytokinin receptor histidine kinase | HC | chr5:42664731-42671175 | 20130731
Soybean Glyma02g47610.1 823 79.4 84.5  
LJGI gnl|LJGI|DC598018 1122 99.7 99.7 similar to UniRef100_A7Q329 Cluster: Chromosome chr12 scaffold_47, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_47, whole genome shotgun sequence - Vitis vinifera (Grape), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3338860.1 length: 641 aa.
IPR003661 Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
method AccNumber shortName E-value location
Molecular Function GO:0000155 phosphorelay sensor kinase activity    
Biological Process GO:0007165 signal transduction    
Cellular Component GO:0016020 membrane    
HMMPfam PF00512 HisKA 1.2e-05 615-641
IPR006189 CHASE
HMMPfam PF03924 CHASE 1.2e-40 331-528
HMMSmart SM01079 no description 4.5e-28 330-529
ProfileScan PS50839 CHASE 37.047 330-554
IPR009082 Signal transduction histidine kinase, homodimeric domain
Molecular Function GO:0004871 signal transducer activity    
Biological Process GO:0007165 signal transduction    
Gene3D G3DSA:1.10.287.130 no description 3.5e-05 608-637
superfamily SSF47384 Homodimeric 4.1e-06 597-641
no_ID  
Coil coil coiled-coil NA 592-613
Seg seg seg NA 172-190
234-246
Wolf-PSORT
Lj2g3v3338860.1	plas 6, E.R. 4, mito_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3338860.1