Miyakogusa Predicted Gene
- Lj2g3v3337520.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S178_LOTJA |
190 |
100.0 |
100.0 |
(tr|I3S178) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT3G07760.2 |
164 |
84.4 |
88.9 |
| Symbols: | Sterile alpha motif (SAM) domain-containing protein | chr3:2476723-2477947 FORWARD LENGTH=125 |
| Medicago |
Medtr5g097240.1 |
186 |
95.6 |
100.0 |
| downward leaf curling protein | HC | chr5:42572777-42577091 | 20130731 |
| Soybean |
Glyma02g47520.3 |
186 |
95.6 |
100.0 |
|
| LJGI |
gnl|LJGI|TC68544 |
535 |
100.0 |
100.0 |
homologue to UniRef100_A7Q338 Cluster: Chromosome chr12 scaffold_47, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_47, whole genome shotgun sequence - Vitis vinifera (Grape), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v3337520.1 |
length: 90 aa. |
| IPR001660 |
Sterile alpha motif domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| ProfileScan |
PS50105 |
SAM_DOMAIN |
11.707 |
15-50 |
| IPR011510 |
Sterile alpha motif, type 2 |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF07647 |
SAM_2 |
1.7e-09 |
15-51 |
| IPR013761 |
Sterile alpha motif/pointed domain |
| Gene3D |
G3DSA:1.10.150.50 |
no description |
1.8e-08 |
14-50 |
| superfamily |
SSF47769 |
SAM/Pointed |
3.8e-13 |
4-90 |
- Wolf-PSORT
Lj2g3v3337520.1 chlo 4, cyto 4, nucl 2, extr 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v3337520.1 |
|