Miyakogusa Predicted Gene

Lj2g3v3336110.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr2

Full length sequence(43247325 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SS27_LOTJA 170 69.4 69.4 (tr|I3SS27) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT1G51355.1 61.2 58.3 71.7 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20898.1); Has 52 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:19041475-19041825 FORWARD LENGTH=116

Medicago Medtr5g096855.1 87.4 56.0 63.0 | hypothetical protein | HC | chr5:42377222-42376845 | 20130731

Soybean Glyma18g07870.1 102 87.9 91.4

LJGI gnl|LJGI|GO012187 565 97.7 97.7 similar to UniRef100_A7NZQ4 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (49%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj2g3v3336110.1 length: 134 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 6-33
48-60

Wolf-PSORT

Lj2g3v3336110.1 chlo 5, mito 4, nucl 3, cyto 1, golg 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj2g3v3336110.1 Not targeted -18.396 -0.636 -3.189 10.92% -14.571

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SS27_LOTJA	170	69.4	69.4	(tr\|I3SS27) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT1G51355.1	61.2	58.3	71.7	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20898.1); Has 52 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr1:19041475-19041825 FORWARD LENGTH=116
Medicago	Medtr5g096855.1	87.4	56.0	63.0	\| hypothetical protein \| HC \| chr5:42377222-42376845 \| 20130731
Soybean	Glyma18g07870.1	102	87.9	91.4
LJGI	gnl\|LJGI\|GO012187	565	97.7	97.7	similar to UniRef100_A7NZQ4 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (49%)

no_ID
Lj2g3v3336110.1				length: 134 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	6-33 48-60