Miyakogusa Predicted Gene

Lj2g3v3336090.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MQE5_SOYBN 256 60.5 67.0 (tr|K7MQE5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G12840.4 184 75.9 88.0 | Symbols: HAP2A, ATHAP2A, NF-YA1 | nuclear factor Y, subunit A1 | chr5:4051147-4052961 REVERSE LENGTH=271
Medicago Medtr3g061510.2 235 53.2 59.1 | CCAAT-binding transcription factor | HC | chr3:24533665-24529746 | 20130731
Soybean Glyma08g45030.1 243 58.9 66.7  
LJGI gnl|LJGI|GO011753 208 86.6 86.6 similar to UniRef100_A7NZQ3 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (29%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3336090.1 length: 261 aa.
IPR001289 CCAAT-binding transcription factor, subunit B
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00616 CCAATSUBUNTB 2.1e-23 115-137
146-169
HMMPanther PTHR12632 TRANSCRIPTION 3.1e-54 22-248
HMMPfam PF02045 CBFB_NFYA 2.5e-29 113-169
HMMSmart SM00521 CCAAT-Binding 8e-35 111-172
ProfileScan PS51152 NFYA_HAP2_2 36.126 112-172
IPR018362 CCAAT-binding factor, conserved site
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0016602 CCAAT-binding factor complex    
PatternScan PS00686 NFYA_HAP2_1 NA 117-137
no_ID  
Seg seg seg NA 4-20
178-200
226-242
Wolf-PSORT
Lj2g3v3336090.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3336090.1