Miyakogusa Predicted Gene

Lj2g3v3303470.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JJK1_SOYBN 943 86.9 90.8 (tr|I1JJK1) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G13180.1 761 72.1 82.4 | Symbols: | NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein | chr3:4236326-4239966 REVERSE LENGTH=523
Medicago Medtr5g096020.1 942 87.7 92.4 | ribosomal RNA small subunit methyltransferase B | HC | chr5:41982400-41975357 | 20130731
Soybean Glyma02g47060.1 940 87.8 91.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3303470.1 length: 528 aa.
IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p
method AccNumber shortName E-value location
HMMPfam PF01189 Nol1_Nop2_Fmu 2.8e-44 251-523
IPR004573 rRNA small subunit methyltransferase B
Biological Process GO:0006364 rRNA processing    
Molecular Function GO:0008649 rRNA methyltransferase activity    
HMMTigr TIGR00563 rsmB: 3.9e-83 104-526
IPR006027 NusB/RsmB/TIM44
Molecular Function GO:0003723 RNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Gene3D G3DSA:1.10.940.10 no description 1.6e-31 94-235
HMMPfam PF01029 NusB 1.7e-23 93-200
superfamily SSF48013 NusB-like 1.8e-28 60-234
IPR023267 RNA (C5-cytosine) methyltransferase
FPrintScan PR02008 RCMTFAMILY 4.8e-23 310-324
339-349
408-420
458-474
509-526
IPR023268 RNA (C5-cytosine) methyltransferase, putative Rsm-related, plant
FPrintScan PR02009 RCMTFMUVIRPL 2.4e-35 68-91
92-108
207-220
485-497
no_ID  
Gene3D G3DSA:3.40.50.150 no description 1.1e-49 321-526
HMMPanther PTHR22807 NOP2(YEAST)-RELATED 8.5e-157 99-528
HMMPanther PTHR22807:SF12 RIBOSOMAL 8.5e-157 99-528
Seg seg seg NA 18-22
superfamily SSF53335 S-adenosyl-L-methionine-dependent 3.9e-65 217-527
Wolf-PSORT
Lj2g3v3303470.1	chlo 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3303470.1