Miyakogusa Predicted Gene

Lj2g3v3260050.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N0E4_SOYBN 221 66.2 81.2 (tr|K7N0E4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G01080.1 169 51.6 71.4 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:45503-46789 REVERSE LENGTH=293
Medicago Medtr7g118230.1 143 55.6 67.3 | RNA recognition motif, a.k.a. RRM, RBD protein | HC | chr7:49069532-49073325 | 20130731
Soybean Glyma19g44950.1 206 57.0 69.9  
LJGI gnl|LJGI|TC69459 716 99.5 99.5 weakly similar to UniRef100_A7PXT7 Cluster: Chromosome chr15 scaffold_37, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_37, whole genome shotgun sequence - Vitis vinifera (Grape), partial (66%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3260050.1 length: 152 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 1.6e-07 1-54
87-147
HMMSmart SM00360 RNA 1.2e-08 1-56
86-150
ProfileScan PS50102 RRM 12.407 1-60
85-152
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 6e-11 1-65
83-150
no_ID  
HMMPanther PTHR24012 FAMILY 1.8e-31 1-150
HMMPanther PTHR24012:SF151SUBFAMILY NOT 1.8e-31 1-150
superfamily SSF54928 RNA-binding 2.8e-13 1-79
85-152
Wolf-PSORT
Lj2g3v3260050.1	chlo 8, cyto 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3260050.1