Miyakogusa Predicted Gene

Lj2g3v3234600.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JJG3_SOYBN 405 88.3 92.8 (tr|I1JJG3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G07810.1 327 72.8 82.0 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:2492875-2495052 FORWARD LENGTH=494
Medicago Medtr3g055990.1 389 83.8 90.8 | heterogeneous nuclear ribonucleoprotein 27C, putative | HC | chr3:22254761-22250364 | 20130731
Soybean Glyma02g46650.1 405 88.3 92.8  
LJGI gnl|LJGI|TC64666 408 100.0 100.0 similar to UniRef100_A7R1X0 Cluster: Chromosome undetermined scaffold_383, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_383, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3234600.3 length: 230 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 6.7e-18 1-38
71-136
HMMSmart SM00360 RNA 2.1e-23 70-142
ProfileScan PS50102 RRM 9.354 69-146
1-45
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 1.7e-24 1-58
59-151
no_ID  
HMMPanther PTHR24012 FAMILY 6.2e-99 1-219
HMMPanther PTHR24012:SF27 SUBFAMILY 6.2e-99 1-219
superfamily SSF54928 RNA-binding 1.4e-10 68-166
1-50
Wolf-PSORT
Lj2g3v3234600.3	cyto 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3234600.3