Miyakogusa Predicted Gene

Lj2g3v3224510.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7K4B8_MEDTR 1155 74.0 84.2 (tr|G7K4B8) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_5g094220 PE=4 SV=1
TAIR_pep AT4G39952.1 759 50.7 68.3 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:18527680-18530007 FORWARD LENGTH=775
Medicago Medtr5g094220.1 1155 74.0 84.2 | PPR containing plant-like protein | HC | chr5:41149037-41146758 | 20130731
Soybean Glyma04g06600.1 992 65.3 76.7  
LJGI gnl|LJGI|TC73387 71.9 93.8 93.8 similar to UniRef100_A9S692 Cluster: Predicted protein; n=1; Physcomitrella patens subsp. patens|Rep: Predicted protein - Physcomitrella patens subsp. patens, partial (3%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3224510.1 length: 763 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.31 153-175
178-207
256-281
285-313
360-382
387-416
659-682
727-751
HMMPfam PF13041 PPR_2 7.1e-13 485-531
584-632
HMMTigr TIGR00756 PPR: 1.3e-05 178-205
285-317
487-520
559-586
587-620
622-655
ProfileScan PS51375 PPR 7.618 74-108
176-210
145-175
282-316
251-281
384-418
484-518
585-619
554-584
519-553
620-654
655-685
721-751
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.8e-07 652-743
no_ID  
HMMPanther PTHR24015 FAMILY 2.4e-238 1-763
HMMPanther PTHR24015:SF168SUBFAMILY NOT 2.4e-238 1-763
Seg seg seg NA 46-68
Wolf-PSORT
Lj2g3v3224510.1	cyto 7, chlo 3, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3224510.1