Miyakogusa Predicted Gene

Lj2g3v3223920.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MHT3_SOYBN 611 55.1 66.0 (tr|K7MHT3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G33060.1 277 41.7 58.0 | Symbols: AtRLP27, RLP27 | receptor like protein 27 | chr2:14025661-14028087 FORWARD LENGTH=808
Medicago Medtr5g095120.1 561 53.4 64.4 | receptor-like protein | LC | chr5:41569704-41573009 | 20130731
Soybean Glyma16g28520.1 552 64.9 77.8  
LJGI gnl|LJGI|TC63707 1189 97.8 97.8 weakly similar to UniRef100_A7QK47 Cluster: Chromosome chr16 scaffold_110, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_110, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3223920.1 length: 555 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
ProfileScan PS51450 LRR 5.664 44-66
22-43
68-89
93-114
119-140
148-170
172-195
196-217
244-267
220-243
268-289
391-410
415-437
439-460
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 52 20-47
66-90
146-170
194-217
266-289
413-437
no_ID  
FPrintScan PR00019 LEURICHRPT 7.1e-06 45-58
146-159
Gene3D G3DSA:3.80.10.10 no description 4.7e-28 2-144
145-317
369-480
HMMPanther PTHR24420 FAMILY 2e-118 1-541
HMMPanther PTHR24420:SF480SUBFAMILY NOT 2e-118 1-541
HMMPfam PF13855 LRR_8 1.4e-06 44-103
147-207
220-278
371-425
HMMSmart SM00365 Leucine-rich 97 66-93
146-172
242-268
413-439
Seg seg seg NA 41-52
65-84
94-108
116-136
superfamily SSF52058 L 9.3e-32 134-483
1-202
Wolf-PSORT
Lj2g3v3223920.1	nucl 5, chlo 3, golg 3, cyto_nucl 3, nucl_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3223920.1