Miyakogusa Predicted Gene
- Lj2g3v3210780.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1M6M4_SOYBN |
204 |
91.7 |
97.2 |
(tr|I1M6M4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G55220.1 |
171 |
74.3 |
89.9 |
| Symbols: | trigger factor type chaperone family protein | chr5:22397677-22400678 FORWARD LENGTH=547 |
| Medicago |
Medtr5g093830.1 |
198 |
89.8 |
94.4 |
| trigger factor-like protein | HC | chr5:40962135-40967479 | 20130731 |
| Soybean |
Glyma14g02220.1 |
204 |
91.7 |
97.2 |
|
| LJGI |
gnl|LJGI|TC62497 |
654 |
100.0 |
100.0 |
similar to UniRef100_A7P0J7 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (44%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v3210780.2 |
length: 109 aa. |
| IPR008880 |
Trigger factor, C-terminal domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006457 |
protein folding |
|
|
| Biological Process |
GO:0015031 |
protein transport |
|
|
| HMMPfam |
PF05698 |
Trigger_C |
4.2e-08 |
4-99 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
59-80 |
- Wolf-PSORT
Lj2g3v3210780.2 cyto 6, chlo 3, nucl 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v3210780.2 |
|