Miyakogusa Predicted Gene

Lj2g3v3188480.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JJC4_SOYBN 664 84.5 90.3 (tr|I1JJC4) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT3G20330.1 532 82.3 93.6 | Symbols: PYRB | PYRIMIDINE B | chr3:7090354-7091904 REVERSE LENGTH=390
Medicago Medtr5g093570.1 633 81.8 89.0 | aspartate carbamoyltransferase, catalytic chain | HC | chr5:40855984-40859737 | 20130731
Soybean Glyma02g46290.1 664 84.5 90.3  
LJGI gnl|LJGI|DC599451 854 98.1 98.1 similar to UniRef100_Q43086 Cluster: Aspartate carbamoyltransferase 1, chloroplast precursor; n=1; Pisum sativum|Rep: Aspartate carbamoyltransferase 1, chloroplast precursor - Pisum sativum (Garden pea), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3188480.1 length: 382 aa.
IPR002082 Aspartate carbamoyltransferase
method AccNumber shortName E-value location
Molecular Function GO:0004070 aspartate carbamoyltransferase activity    
Biological Process GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process    
FPrintScan PR00101 ATCASE 5.7e-40 112-134
152-161
206-223
298-307
338-343
360-374
HAMAP MF_00001 Asp_carb_tr 35.353 76-381
HMMTigr TIGR00670 asp_carb_tr: 2e-106 78-379
IPR006130 Aspartate/ornithine carbamoyltransferase
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0016597 amino acid binding    
Molecular Function GO:0016743 carboxyl- or carbamoyltransferase activity    
FPrintScan PR00100 AOTCASE 1.6e-26 122-141
207-218
334-343
344-367
Gene3D G3DSA:3.40.50.1370 no description 1.2e-54 79-216
217-366
PatternScan PS00097 CARBAMOYLTRANSFERASE NA 122-129
superfamily SSF53671 Aspartate/ornithine 1.2e-100 71-379
IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0016597 amino acid binding    
Molecular Function GO:0016743 carboxyl- or carbamoyltransferase activity    
HMMPfam PF00185 OTCace 7.2e-36 226-377
IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0016743 carboxyl- or carbamoyltransferase activity    
HMMPfam PF02729 OTCace_N 9.6e-45 78-220
no_ID  
HMMPanther PTHR11405 CARBAMOYLTRANSFERASE 7e-178 72-374
HMMPanther PTHR11405:SF16 SUBFAMILY 7e-178 72-374
Wolf-PSORT
Lj2g3v3188480.1	chlo 10, nucl 1.5, nucl_plas 1.5, cyto 1, mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3188480.1