Miyakogusa Predicted Gene

Lj2g3v3188380.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M6P4_SOYBN 422 63.0 74.6 (tr|I1M6P4) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT3G20420.1 337 51.2 68.9 | Symbols: RTL2, ATRTL2 | RNAse THREE-like protein 2 | chr3:7119371-7120895 REVERSE LENGTH=391
Medicago Medtr8g058930.1 425 60.4 76.5 | ribonuclease III domain protein | HC | chr8:20473610-20470150 | 20130731
Soybean Glyma14g02490.1 422 63.0 74.6  
LJGI gnl|LJGI|TC68682 2014 99.9 99.9 weakly similar to UniRef100_A7P0L3 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (76%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3188380.1 length: 339 aa.
IPR000999 Ribonuclease III domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0004525 ribonuclease III activity    
Biological Process GO:0006396 RNA processing    
Gene3D G3DSA:1.10.1520.10 no description 5.5e-43 7-166
HMMPfam PF00636 Ribonuclease_3 2.2e-19 38-147
HMMSmart SM00535 Ribonuclease 3.4e-29 20-170
ProfileScan PS50142 RNASE_3_2 33.522 5-147
superfamily SSF69065 RNase 4.5e-40 1-175
IPR001159 Double-stranded RNA-binding
Molecular Function GO:0003725 double-stranded RNA binding    
HMMPfam PF00035 dsrm 7.5e-08 176-236
262-331
HMMSmart SM00358 Double-stranded 2.9e-08 176-237
262-334
ProfileScan PS50137 DS_RBD 9.611 175-238
261-335
IPR011907 Ribonuclease III
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0004525 ribonuclease III activity    
Biological Process GO:0016075 rRNA catabolic process    
HMMPanther PTHR11207 RIBONUCLEASE 3.7e-59 7-335
IPR014720 Double-stranded RNA-binding-like domain
Gene3D G3DSA:3.30.160.20 no description 1.4e-11 176-236
263-334
no_ID  
Seg seg seg NA 224-240
superfamily SSF54768 dsRNA-binding 9.3e-11 128-236
243-333
Wolf-PSORT
Lj2g3v3188380.1	cyto 10, chlo 1, nucl 1, pero 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3188380.1